BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A11SP1|AL428659
(838 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1796 1661 0.0
3x_Contig1670 143 7e-34
>3x_Contig1796
Length = 24558
Score = 1661 bits (838), Expect = 0.0
Identities = 838/838 (100%)
Strand = Plus / Minus
Query: 1 aaccatcgcgttgctcctttaattttgcttttaggagtttgaaagtttaaatcagagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4288 aaccatcgcgttgctcctttaattttgcttttaggagtttgaaagtttaaatcagagagg 4229
Query: 61 gtgaagcatctttatatcaaccgtttgatgttctccggtgtctgatcacaactaggctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4228 gtgaagcatctttatatcaaccgtttgatgttctccggtgtctgatcacaactaggctcc 4169
Query: 121 gagctatgaaatttaagatgtagataacgcaaaatttcaagtaaagatttcttgcttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4168 gagctatgaaatttaagatgtagataacgcaaaatttcaagtaaagatttcttgcttgtg 4109
Query: 181 ggtatccgaatttgctcaagttggattggacgatgatgagatttggtagcaggcgctttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4108 ggtatccgaatttgctcaagttggattggacgatgatgagatttggtagcaggcgctttt 4049
Query: 241 tttagagtgttagtagtatacatgtcaatagattctatactggcttagagtttgataatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4048 tttagagtgttagtagtatacatgtcaatagattctatactggcttagagtttgataatg 3989
Query: 301 caattattggatggttgaactgatgctctgtatgcgaacttcagctaattaagtgtatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3988 caattattggatggttgaactgatgctctgtatgcgaacttcagctaattaagtgtatta 3929
Query: 361 tttaagatgttctacttggcttccgcctgacggataatttaatatagagccacaatagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3928 tttaagatgttctacttggcttccgcctgacggataatttaatatagagccacaatagat 3869
Query: 421 aggttgtcaaatccgaataggaattgaatgaagatgccatttacttatatacttgttaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3868 aggttgtcaaatccgaataggaattgaatgaagatgccatttacttatatacttgttaca 3809
Query: 481 tctgatgttcaaatgctgggtgccgtagcgttgatgttgatcatagtgacttcagaattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3808 tctgatgttcaaatgctgggtgccgtagcgttgatgttgatcatagtgacttcagaattc 3749
Query: 541 cttctgtatcgtttccataaagaggcgggctggggataagtacaatgccgtggaacaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3748 cttctgtatcgtttccataaagaggcgggctggggataagtacaatgccgtggaacaata 3689
Query: 601 cgtcattgttaaacattaaatcgatcctatatcgtctctccattacaactgttgacgaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3688 cgtcattgttaaacattaaatcgatcctatatcgtctctccattacaactgttgacgaaa 3629
Query: 661 acgtaggagtttacaggatattcatttaaaagtttttataagacttgaccataatgaata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3628 acgtaggagtttacaggatattcatttaaaagtttttataagacttgaccataatgaata 3569
Query: 721 aaaagctgagaaaatctaagtgatttctgctatggttatcattcctcggaagcattaccg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3568 aaaagctgagaaaatctaagtgatttctgctatggttatcattcctcggaagcattaccg 3509
Query: 781 gaacattgagtaacatctttgttgtcaatacagtatccataaacgacactattcgtgt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3508 gaacattgagtaacatctttgttgtcaatacagtatccataaacgacactattcgtgt 3451
>3x_Contig1670
Length = 9382
Score = 143 bits (72), Expect = 7e-34
Identities = 115/128 (89%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 621 tcgatcctatatcgtctctccattacaactgttgacgaaaacgtaggagtttacaggata 680
|||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||||||
Sbjct: 4639 tcgatcctatatcgtctctcaattacaactgtcgacgaaagtatagcagtttacaggata 4698
Query: 681 ttcatttaaaagtttttataagacttgaccataatgaataaaaagctgagaaaatctaag 740
|||| | |||||||||| |||||||||||||||||| |||||||| |||| |||||||||
Sbjct: 4699 ttca-tcaaaagtttttctaagacttgaccataatggataaaaagatgaggaaatctaag 4757
Query: 741 tgatttct 748
|||||||
Sbjct: 4758 cgatttct 4765
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5953
Number of Sequences: 1807
Number of extensions: 5953
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 2
length of query: 838
length of database: 10,358,551
effective HSP length: 16
effective length of query: 822
effective length of database: 10,329,639
effective search space: 8490963258
effective search space used: 8490963258
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)